Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_2015Thioredoxin reductase. (315 aa)    
Predicted Functional Partners:
CSCA_0234
Selenate reductase YgfK.
  
 
 0.917
CSCA_2014
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.916
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
     
 0.909
CSCA_0169
Cystathionine gamma-synthase.
   
 
 0.906
CSCA_2942
Methionine gamma-lyase.
   
 
 0.906
CSCA_4341
Thioredoxin; Belongs to the thioredoxin family.
 
 0.749
CSCA_3839
Thioredoxin domain protein.
 
 
 0.691
CSCA_2031
Thioredoxin domain protein; Belongs to the thioredoxin family.
 
 
 0.675
CSCA_0450
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.626
CSCA_0616
Redox-active disulfide protein.
  
 
 0.621
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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