Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
CSCA_2033Choline/carnitine/betaine transporter protein; Belongs to the BCCT transporter (TC 2.A.15) family. (496 aa)    
Predicted Functional Partners:
CSCA_2036
Betaine reductase.
 
     0.542
CSCA_2032
Thioredoxin reductase.
       0.533
CSCA_2031
Thioredoxin domain protein; Belongs to the thioredoxin family.
       0.520
CSCA_2034
Glycine reductase complex component B subunit gamma.
       0.519
CSCA_2035
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family protein.
       0.477
CSCA_2355
Sodium:solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.474
CSCA_2030
Glycine/sarcosine/betaine reductase complex protein A.
       0.465
CSCA_2029
Glycine reductase.
       0.449
CSCA_2037
Transcriptional regulator, TetR family.
 
  
 0.432
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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