Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_2038Alcohol dehydrogenase GroES domain protein. (357 aa)    
Predicted Functional Partners:
CSCA_0019
Zinc-containing alcohol dehydrogenase.
  
  
 
0.923
CSCA_2304
Zinc-containing alcohol dehydrogenase.
  
  
 
0.923
CSCA_2039
Sigma54 specific transcriptional regulator, Fis family.
 
  
 0.593
CSCA_4763
PTS system Galactitol-specific IIC component.
  
 0.508
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.446
CSCA_2674
Manganese and iron superoxide dismutase.
   
  
 0.436
CSCA_4448
Alcohol dehydrogenase zinc-binding domain protein.
  
  
0.433
CSCA_0059
2,5-didehydrogluconate reductase.
 
 
 0.431
CSCA_2040
RarD protein, DMT superfamily transporter.
       0.402
CSCA_4737
4-aminobutyrate aminotransferase-related aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.400
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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