Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_2049Hypothetical protein. (428 aa)    
Predicted Functional Partners:
CSCA_2050
Two component transcriptional regulator, LytTR family.
 
  
 0.947
CSCA_3303
Hypothetical protein.
  
     0.607
CSCA_4824
Hypothetical protein.
  
     0.567
CSCA_0577
Response regulator.
  
 
 0.477
CSCA_1858
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.475
CSCA_3333
Hypothetical protein.
  
     0.453
CSCA_1824
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
  
 
 0.451
CSCA_0195
Protein of unknown function DUF1540.
  
     0.440
CSCA_1438
Hypothetical protein.
  
     0.433
CSCA_1787
C_GCAxxG_C_C family protein.
  
     0.433
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.