Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_2053Diguanylate cyclase and metal dependent phosphohydrolase. (824 aa)    
Predicted Functional Partners:
CSCA_4382
Signal transduction protein.
 
 
 0.682
CSCA_0875
Diguanylate cyclase (GGDEF) domain protein.
 
 0.664
CSCA_1760
Multi-sensor hybrid histidine kinase.
 
   
 0.577
CSCA_1182
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.519
CSCA_4155
Histidine kinase.
 
 
 0.517
CSCA_4803
Class II glutamine amidotransferase.
  
  
 0.516
CSCA_3574
PAS domain S-box domain-containing protein.
 
   
 0.495
CSCA_2054
Hypothetical protein.
  
 
 0.491
CSCA_3200
CheC, inhibitor of MCP methylation / FliN fusion protein.
  
 
 0.480
CSCA_0448
Diguanylate cyclase (GGDEF) domain protein.
 
 
0.476
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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