Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_2123Formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (672 aa)    
Predicted Functional Partners:
CSCA_2752
4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.886
CSCA_1515
4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.884
CSCA_4946
NADH dehydrogenase (quinone).
  
 
 0.881
CSCA_0539
4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 
 0.837
CSCA_1967
Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein.
  
 
 0.766
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.727
CSCA_4284
Translation elongation factor Tu.
   
 
 0.727
CSCA_0811
NADH dehydrogenase (quinone).
  
 
 0.711
CSCA_2650
NADH dehydrogenase (quinone).
  
 
 0.711
CSCA_5325
Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
 0.669
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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