Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CSCA_2139Dihydropyrimidine dehydrogenase. (400 aa)    
Predicted Functional Partners:
CSCA_2141
D-hydantoinase.
 
 0.995
CSCA_0238
D-hydantoinase.
 
 0.992
CSCA_3215
Pyruvate:ferredoxin oxidoreductase.
  
 
 0.975
CSCA_1352
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
 
 0.974
CSCA_2023
Glutamate synthase (NADPH), homotetrameric.
 
 
 0.966
CSCA_5020
Glutamate synthase (NADPH), homotetrameric.
 
 
 0.966
CSCA_2949
Glutamate synthase (NADPH), homotetrameric.
 
 
 0.965
pyrR
Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.
  
 
 0.962
CSCA_2143
Allantoate amidohydrolase.
 
 0.961
CSCA_2140
Hypothetical protein.
 
 
 0.960
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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