Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSCA_2215Peptidase S41. (425 aa)    
Predicted Functional Partners:
CSCA_1304
TPR repeat-containing protein.
  
 
 0.875
CSCA_2213
Protein of unknown function DUF214.
   
   0.709
CSCA_2214
ABC transporter related protein.
     
 0.694
CSCA_1235
MCP methyltransferase, CheR-type.
  
 
 0.637
CSCA_1428
Hypothetical protein.
 
 
 0.588
CSCA_4683
Hypothetical protein.
 
 
 0.583
CSCA_4173
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
    0.562
CSCA_4179
Peptidase families S8 and S53.
 
 
 0.485
CSCA_4706
Glycosyl transferase family 2.
  
 
 0.482
CSCA_2216
Two component sensor histidine kinase.
     
 0.472
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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