Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_2244Rubredoxin-type Fe(Cys)4 protein. (53 aa)    
Predicted Functional Partners:
CSCA_4512
Desulfoferrodoxin.
 
  
 0.723
CSCA_1516
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.686
CSCA_2751
Nitrate reductase, NADH oxidase subunit.
  
 
 0.686
CSCA_1492
Beta-lactamase domain protein.
 
  
 0.631
CSCA_0634
Nitrite and sulphite reductase 4Fe-4S region; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.621
CSCA_2417
Hypothetical protein.
  
 
 0.621
CSCA_2676
Pyridine nucleotide-disulfide oxidoreductase; Belongs to the sulfur carrier protein TusA family.
  
  
 0.614
CSCA_4934
Beta-lactamase domain protein.
 
  
 0.601
CSCA_1670
Hydrogenase (NiFe) small subunit HydA.
  
 
 0.587
CSCA_1845
Beta-lactamase domain protein.
 
  
 0.535
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.