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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_2264TPP-dependent acetoin dehydrogenase beta-subunit. (323 aa)    
Predicted Functional Partners:
CSCA_2261
Dihydrolipoamide dehydrogenase.
 
 0.999
CSCA_2265
TPP-dependent acetoin dehydrogenase alpha-subunit.
 0.999
CSCA_2262
Dihydrolipoamide acetyltransferase.
 0.998
CSCA_3291
Branched-chain alpha-keto acid dehydrogenase subunit E2.
 
 0.989
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.979
CSCA_4546
Dihydrolipoamide dehydrogenase.
 
 0.976
CSCA_2263
ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
  
 0.899
CSCA_0658
NADH:flavin oxidoreductase/NADH oxidase.
 
 0.872
CSCA_0403
NADH:flavin oxidoreductase/NADH oxidase.
  
 0.854
CSCA_0756
NADH:flavin oxidoreductase/NADH oxidase.
  
 0.854
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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