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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_2265TPP-dependent acetoin dehydrogenase alpha-subunit. (326 aa)    
Predicted Functional Partners:
CSCA_2261
Dihydrolipoamide dehydrogenase.
 
 0.999
CSCA_2264
TPP-dependent acetoin dehydrogenase beta-subunit.
 0.999
CSCA_2262
Dihydrolipoamide acetyltransferase.
 
 0.992
CSCA_3291
Branched-chain alpha-keto acid dehydrogenase subunit E2.
 
 0.983
CSCA_2263
ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
  
 0.914
CSCA_4546
Dihydrolipoamide dehydrogenase.
 
 
 0.910
CSCA_2266
Hypothetical protein.
 
     0.842
CSCA_2287
Lipoyltransferase and lipoate-protein ligase.
 
 
 0.773
CSCA_3568
Lipoyltransferase and lipoate-protein ligase.
 
 
 0.768
CSCA_0658
NADH:flavin oxidoreductase/NADH oxidase.
 
 
 0.749
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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