Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
CSCA_2293Signal transduction histidine kinase regulating citrate/malate metabolism. (422 aa)    
Predicted Functional Partners:
CSCA_2294
Two component transcriptional regulator, LytTR family.
 
  
 0.909
CSCA_0577
Response regulator.
 
 
 0.797
CSCA_5327
SH3 type 3 domain protein.
  
     0.640
CSCA_1929
Hypothetical protein.
  
     0.633
CSCA_0575
Putative sensor histidine kinase.
  
     0.612
CSCA_1928
Hypothetical protein.
  
     0.522
CSCA_4460
GNAT family acetyltransferase.
  
     0.521
CSCA_0671
Hypothetical protein.
  
     0.507
CSCA_4579
Response regulator receiver protein.
  
     0.485
CSCA_1330
Hypothetical protein.
  
     0.482
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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