Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_2403EmrA-related transporter protein. (218 aa)    
Predicted Functional Partners:
CSCA_2401
Drug resistance transporter, EmrB/QacA subfamily.
 
 
 0.894
CSCA_2402
Drug resistance transporter, EmrB/QacA subfamily.
 
 
 0.861
CSCA_2404
Secretion protein HlyD family protein.
 
     0.859
CSCA_1680
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
 
 0.786
CSCA_0326
Drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family protein; Belongs to the major facilitator superfamily.
 
 
 0.783
CSCA_3770
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
 
 0.776
CSCA_4079
Secretion protein HlyD family protein.
  
     0.710
CSCA_1682
Secretion protein HlyD family protein.
  
     0.697
CSCA_3714
Secretion protein HlyD family protein.
  
     0.695
CSCA_4664
Auxiliary transport protein, membrane fusion protein (MFP) family protein.
  
     0.679
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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