Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_2407Putative cell wall binding repeat 2-containing protein. (78 aa)    
Predicted Functional Partners:
CSCA_4853
Putative cell wall binding repeat 2-containing protein.
  
     0.774
CSCA_2047
Cell wall-binding protein.
  
     0.773
CSCA_2408
ABC transporter permease.
 
    0.675
CSCA_4781
Glycosyltransferase.
  
     0.633
CSCA_3604
Membrane spanning protein.
  
     0.604
CSCA_2410
ABC transporter related protein.
 
     0.499
CSCA_3603
ABC transporter related protein.
  
     0.459
CSCA_1373
Phage regulatory protein.
  
     0.431
CSCA_2409
Transporter.
  
    0.425
CSCA_4789
Oxidoreductase domain protein.
  
     0.419
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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