Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CSCA_0385 | CSCA_0583 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | 0.455 |
CSCA_0385 | CSCA_1179 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | 0.442 |
CSCA_0385 | CSCA_1238 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Chemotaxis protein. | 0.977 |
CSCA_0385 | CSCA_2415 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Response regulator receiver protein. | 0.858 |
CSCA_0385 | CSCA_3200 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | CheC, inhibitor of MCP methylation / FliN fusion protein. | 0.888 |
CSCA_0385 | CSCA_3204 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | CheC, inhibitor of MCP methylation. | 0.720 |
CSCA_0385 | CSCA_3205 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | CheA signal transduction histidine kinase. | 0.963 |
CSCA_0385 | CSCA_3574 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | PAS domain S-box domain-containing protein. | 0.578 |
CSCA_0385 | CSCA_3575 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Methyl-accepting chemotaxis sensory transducer. | 0.454 |
CSCA_0583 | CSCA_0385 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | 0.455 |
CSCA_0583 | CSCA_1238 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Chemotaxis protein. | 0.981 |
CSCA_0583 | CSCA_2415 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Response regulator receiver protein. | 0.843 |
CSCA_0583 | CSCA_3200 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | CheC, inhibitor of MCP methylation / FliN fusion protein. | 0.584 |
CSCA_0583 | CSCA_3204 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | CheC, inhibitor of MCP methylation. | 0.633 |
CSCA_0583 | CSCA_3205 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | CheA signal transduction histidine kinase. | 0.967 |
CSCA_1179 | CSCA_0385 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | 0.442 |
CSCA_1179 | CSCA_1238 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Chemotaxis protein. | 0.980 |
CSCA_1179 | CSCA_2415 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Response regulator receiver protein. | 0.838 |
CSCA_1179 | CSCA_3200 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | CheC, inhibitor of MCP methylation / FliN fusion protein. | 0.571 |
CSCA_1179 | CSCA_3204 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | CheC, inhibitor of MCP methylation. | 0.636 |
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