STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_2467ABC transporter. (191 aa)    
Predicted Functional Partners:
CSCA_2475
Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.943
CSCA_2474
ABC transporter related protein.
 
 
 0.938
CSCA_0541
Iron ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.920
CSCA_3766
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.919
CSCA_0668
Fe3+ ABC superfamily ATP binding cassette transporter, membrane protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.916
CSCA_0542
Iron ABC transporter ATPase.
 
 
 0.875
CSCA_3767
ABC transporter, ATP-binding protein.
 
 
 0.856
CSCA_2470
ABC transporter.
  
     0.766
CSCA_1809
Hypothetical protein.
  
 
 0.729
CSCA_4183
Hypothetical protein.
  
 
 0.729
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.