STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_2500NG,NG-dimethylarginine dimethylaminohydrolase. (259 aa)    
Predicted Functional Partners:
CSCA_1887
Pyridoxamine 5'-phosphate oxidase-related FMN-binding.
  
    0.590
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
 
  0.572
CSCA_0434
FRG domain protein.
    
  0.510
CSCA_1839
Acetylornithine and succinylornithine aminotransferase.
  
  
 0.504
CSCA_2499
Arginine utilization regulatory protein RocR.
       0.491
CSCA_2961
Calcium/proton antiporter, CaCA family; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.
  
    0.481
CSCA_2372
Ribonuclease BN; Belongs to the UPF0761 family.
  
    0.479
CSCA_4388
Ribonuclease BN; Belongs to the UPF0761 family.
  
    0.479
CSCA_1231
TspO and MBR like protein.
   
    0.464
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 
 0.427
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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