Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_2663DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (392 aa)    
Predicted Functional Partners:
CSCA_3170
Polysaccharide biosynthesis protein CapD.
 
  
 0.916
CSCA_4780
Polysaccharide biosynthesis protein CapD.
 
  
 0.900
CSCA_4788
Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.842
CSCA_3185
Acylneuraminate cytidylyltransferase.
 
  
 0.827
CSCA_3169
Glycosyl transferase-like protein.
 
  
 0.808
CSCA_3176
Pseudaminic acid synthase.
 
  
 0.802
CSCA_2664
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
    
0.771
CSCA_4789
Oxidoreductase domain protein.
 
  
 0.742
CSCA_4790
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase.
 
 
 0.727
CSCA_2662
Transcriptional regulator, MerR family.
       0.701
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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