Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_2891Putative metal-dependent peptidase. (459 aa)    
Predicted Functional Partners:
CSCA_2892
ATPase associated with various cellular activities AAA_5.
 
    0.947
CSCA_2893
Hypothetical protein.
 
     0.915
CSCA_1474
Phosphoesterase HXTX.
  
     0.662
CSCA_2888
FeS cluster assembly scaffold protein NifU.
       0.564
CSCA_2890
Transcriptional regulator, BadM/Rrf2 family.
       0.564
CSCA_4561
Endodeoxyribonuclease RusA.
  
     0.551
iscS-2
Cysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
       0.539
CSCA_3301
Hypothetical protein.
  
     0.499
CSCA_4433
Protein of unknown function DUF1540.
  
     0.494
CSCA_3147
Flagellar hook-length control protein.
  
     0.479
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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