Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_2932Small acid-soluble spore protein alpha/beta type. (63 aa)    
Predicted Functional Partners:
CSCA_3526
Sporulation protein YqfD.
 
     0.713
CSCA_4447
Hypothetical protein.
  
  
 0.692
CSCA_4230
Transcriptional regulator, AbrB family.
  
  
 0.681
CSCA_2769
Peptidase S14 ClpP.
  
     0.660
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.660
CSCA_4446
Stage v sporulation protein ac.
  
  
 0.629
CSCA_3906
Sporulation transcriptional regulator SpoIIID.
  
  
 0.613
CSCA_2848
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.610
CSCA_3059
Stage IV sporulation protein B.
  
   
 0.584
CSCA_3080
Stage III sporulation protein AA.
  
   
 0.577
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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