Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_3191Flagellar protein FliS. (128 aa)    
Predicted Functional Partners:
CSCA_3197
Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
 
 
 0.996
CSCA_3200
CheC, inhibitor of MCP methylation / FliN fusion protein.
 
  
 0.996
CSCA_3190
Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.993
CSCA_3149
ATPase FliI/YscN.
 
 
 0.991
CSCA_3196
Flagellar hook-associated protein 3.
 
 
 0.990
CSCA_3188
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.989
CSCA_3201
Flagellar motor switch protein FliM.
 
  
 0.984
CSCA_3157
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.981
CSCA_3199
Anti-sigma-28 factor, FlgM.
  
 
 0.981
CSCA_3138
Bifunctional flagellar biosynthesis proteins FliR/FlhB; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
 
  
 0.980
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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