STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_3203Response regulator receiver protein. (119 aa)    
Predicted Functional Partners:
CSCA_3200
CheC, inhibitor of MCP methylation / FliN fusion protein.
 
 
 0.996
CSCA_3204
CheC, inhibitor of MCP methylation.
 
 
 0.996
CSCA_3205
CheA signal transduction histidine kinase.
 
 0.987
cheD
CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
  
 0.963
CSCA_3209
CheW protein.
 
 
 0.947
CSCA_0137
Putative chemotaxis protein CheA.
 
 0.938
CSCA_3202
CheW protein.
 
 
 0.936
CSCA_3206
MCP methyltransferase, CheR-type.
 
  
 0.936
CSCA_1238
Chemotaxis protein.
 
0.917
CSCA_5320
CheC-like family protein.
  
 
 0.910
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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