Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
CSCA_3221Nitroreductase. (249 aa)    
Predicted Functional Partners:
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.603
CSCA_3222
Peptidase M16 domain protein.
     
 0.526
CSCA_3220
DNA mismatch repair protein MutS domain protein.
 
     0.518
CSCA_0161
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.498
CSCA_0653
ABC-2 type transporter.
 
  
 0.476
CSCA_0714
YCII-related protein.
  
     0.467
tadA
CMP/dCMP deaminase zinc-binding; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
 0.463
CSCA_3627
AMP-binding enzyme.
   
 
 0.455
CSCA_0702
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
    0.409
CSCA_3713
Hypothetical protein.
  
  
 0.401
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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