Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSCA_3249Hypothetical protein; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (307 aa)    
Predicted Functional Partners:
CSCA_3247
PTS system, fructose family, IIA component.
 
  
 0.997
CSCA_2593
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
  
 0.995
CSCA_3248
Hypothetical protein.
 
  
 0.994
CSCA_2134
PTS system, fructose subfamily, IIC subunit.
 
  
 0.976
CSCA_3801
Protein associated with the phosphotransferase system IIB subunit.
 
  
 0.903
CSCA_3800
PTS system, fructose-specific IIC component.
 
  
 0.902
CSCA_2137
Transcriptional regulator, DeoR family.
 
  
 0.815
CSCA_2377
Transcriptional regulator, DeoR family.
 
  
 0.811
CSCA_2135
Putative PTS IIA-like nitrogen-regulatory protein PtsN.
 
  
 0.806
CSCA_3250
Tagatose-bisphosphate aldolase.
  
  
 0.798
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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