Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_3369Hypothetical protein. (179 aa)    
Predicted Functional Partners:
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
   0.623
CSCA_3370
HTH motif containing protein.
       0.533
CSCA_3368
Hypothetical protein.
       0.519
CSCA_4419
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.509
CSCA_5301
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
   
 0.473
CSCA_0599
HAMP domain protein.
 
   
 0.448
CSCA_4788
Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.430
CSCA_3371
Hypothetical protein.
     
 0.429
CSCA_0039
Hypothetical protein.
  
     0.417
CSCA_1498
ATP-dependent DNA helicase RecQ.
       0.415
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.