Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_3374Integral membrane sensor signal transduction histidine kinase. (426 aa)    
Predicted Functional Partners:
CSCA_3373
Two component LuxR family transcriptional regulator.
 
 
 0.977
CSCA_0197
Two component transcriptional regulator, LuxR family.
 
 
 0.901
CSCA_0027
Transcriptional regulator, LuxR family.
 
 
 0.880
CSCA_0024
Two component transcriptional regulator, LuxR family.
 
 
 0.875
CSCA_2415
Response regulator receiver protein.
  
 
 0.623
CSCA_3574
PAS domain S-box domain-containing protein.
  
 
 0.584
CSCA_0502
Diguanylate cyclase (GGDEF) domain protein.
  
 
 0.552
CSCA_3372
Hypothetical protein.
     
 0.536
CSCA_1760
Multi-sensor hybrid histidine kinase.
  
 
 0.511
CSCA_1182
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.507
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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