sigA protein (Clostridium scatologenes) - STRING interaction network

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sigA

RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (361 aa)

Predicted Functional Partners:

dnaG

0.981

rpoB

0.970

rpoA

0.967

rpoC

0.954

rpoZ

0.879

nusA

0.836

CSCA_2676

0.815

CSCA_4260

0.814

whiA

0.774

CSCA_0506

0.761

Your Current Organism:

Clostridium scatologenes

NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSCA_0506	rpoA	CSCA_0506	CSCA_4315	Transcriptional regulator, MerR family.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.732
CSCA_0506	rpoB	CSCA_0506	CSCA_4278	Transcriptional regulator, MerR family.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.777
CSCA_0506	rpoC	CSCA_0506	CSCA_4279	Transcriptional regulator, MerR family.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.735
CSCA_0506	rpoZ	CSCA_0506	CSCA_2844	Transcriptional regulator, MerR family.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.727
CSCA_0506	sigA	CSCA_0506	CSCA_3513	Transcriptional regulator, MerR family.	RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.761
CSCA_2676	sigA	CSCA_2676	CSCA_3513	Pyridine nucleotide-disulfide oxidoreductase; Belongs to the sulfur carrier protein TusA family.	RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.815
CSCA_4260	rpoA	CSCA_4260	CSCA_4315	Transcriptional regulator, CarD family.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.838
CSCA_4260	rpoB	CSCA_4260	CSCA_4278	Transcriptional regulator, CarD family.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.854
CSCA_4260	rpoC	CSCA_4260	CSCA_4279	Transcriptional regulator, CarD family.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.814
CSCA_4260	rpoZ	CSCA_4260	CSCA_2844	Transcriptional regulator, CarD family.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.809
CSCA_4260	sigA	CSCA_4260	CSCA_3513	Transcriptional regulator, CarD family.	RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.814
dnaG	nusA	CSCA_3514	CSCA_2782	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	NusA antitermination factor; Participates in both transcription termination and antitermination.	0.517
dnaG	rpoA	CSCA_3514	CSCA_4315	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.627
dnaG	rpoB	CSCA_3514	CSCA_4278	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.657
dnaG	rpoC	CSCA_3514	CSCA_4279	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.585
dnaG	sigA	CSCA_3514	CSCA_3513	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.981
nusA	dnaG	CSCA_2782	CSCA_3514	NusA antitermination factor; Participates in both transcription termination and antitermination.	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.517
nusA	rpoA	CSCA_2782	CSCA_4315	NusA antitermination factor; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.987
nusA	rpoB	CSCA_2782	CSCA_4278	NusA antitermination factor; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.982
nusA	rpoC	CSCA_2782	CSCA_4279	NusA antitermination factor; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.960

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