Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
araAL-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (488 aa)    
Predicted Functional Partners:
araB
L-ribulokinase.
 
 
 0.995
CSCA_3593
L-ribulose-5-phosphate 4-epimerase.
 
  
 0.975
CSCA_3590
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.952
CSCA_2539
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.923
CSCA_1190
L-ribulose-5-phosphate 4-epimerase.
 
  
 0.915
CSCA_0001
Aldose 1-epimerase.
     
  0.900
CSCA_3595
Carbohydrate kinase FGGY.
 
  
 0.876
CSCA_3596
LacI family transcription regulator.
 
   
 0.757
CSCA_1188
Regulatory protein GntR HTH.
 
   
 0.706
rhaD
Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
  
  
 0.686
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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