Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_3604Membrane spanning protein. (250 aa)    
Predicted Functional Partners:
CSCA_3603
ABC transporter related protein.
 
 
 0.970
CSCA_3605
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.
 
     0.948
CSCA_3606
Two component transcriptional regulator, winged helix family.
 
     0.836
CSCA_2047
Cell wall-binding protein.
  
     0.718
CSCA_5165
Putative cell wall binding repeat 2-containing protein.
  
     0.715
CSCA_3715
Ig domain protein.
  
     0.713
CSCA_2240
Cell wall binding repeat 2 family protein.
  
     0.710
CSCA_4853
Putative cell wall binding repeat 2-containing protein.
  
     0.697
CSCA_1783
Cwp66-like protein/N-acetylmuramoyl-L-alanine amidase.
  
     0.690
CSCA_2105
Putative cell wall binding repeat 2-containing protein.
  
     0.684
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.