Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_3711Hypothetical protein. (266 aa)    
Predicted Functional Partners:
CSCA_1553
Extracellular ligand-binding receptor.
  
  
 0.837
CSCA_4182
dUTPase.
  
     0.622
CSCA_1174
Hypothetical protein.
 
 
   0.601
CSCA_2420
Spore coat assembly protein SafA.
 
 
   0.593
CSCA_5219
Phage protein.
   
   0.533
CSCA_3712
Hypothetical protein.
       0.506
CSCA_3713
Hypothetical protein.
       0.506
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
    0.501
CSCA_3714
Secretion protein HlyD family protein.
       0.487
CSCA_4803
Class II glutamine amidotransferase.
     
 0.486
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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