Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_3731DNA protecting protein DprA. (135 aa)    
Predicted Functional Partners:
CSCA_3733
Mg chelatase, subunit ChlI.
 
 0.927
CSCA_3732
DNA protecting protein DprA.
 
 0.862
CSCA_3899
Hypothetical protein.
 
 
 0.860
CSCA_2798
Mg chelatase, subunit ChlI.
 
 
 0.824
CSCA_3549
ComEC/Rec2-related protein.
 
  
 0.734
CSCA_2799
Protein of unknown function UPF0102; Belongs to the UPF0102 family.
 
  
 0.687
CSCA_4604
Peptidase A24A domain protein.
  
  
 0.684
CSCA_4865
Phosphoesterase RecJ domain protein.
 
   
 0.682
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 
 0.658
CSCA_3200
CheC, inhibitor of MCP methylation / FliN fusion protein.
  
    0.644
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.