Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CSCA_3732DNA protecting protein DprA. (125 aa)    
Predicted Functional Partners:
CSCA_3733
Mg chelatase, subunit ChlI.
 
 
 0.875
CSCA_3731
DNA protecting protein DprA.
 
 0.862
CSCA_3200
CheC, inhibitor of MCP methylation / FliN fusion protein.
  
    0.843
CSCA_3899
Hypothetical protein.
  
 
 0.834
CSCA_3549
ComEC/Rec2-related protein.
 
  
 0.823
CSCA_1760
Multi-sensor hybrid histidine kinase.
  
  
 0.811
CSCA_3574
PAS domain S-box domain-containing protein.
  
  
 0.792
CSCA_4604
Peptidase A24A domain protein.
  
  
 0.789
CSCA_5174
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
  
 0.762
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 
 0.744
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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