Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_3771EmrA-related transporter protein. (216 aa)    
Predicted Functional Partners:
CSCA_3770
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
 
 0.939
CSCA_3772
Auxiliary transport protein, membrane fusion protein (MFP) family protein.
 
     0.927
CSCA_3769
Transcriptional regulator, MarR family.
 
  
 0.841
CSCA_2401
Drug resistance transporter, EmrB/QacA subfamily.
 
 
 0.807
CSCA_0326
Drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family protein; Belongs to the major facilitator superfamily.
 
 
 0.776
CSCA_1680
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
 
 0.771
CSCA_2404
Secretion protein HlyD family protein.
 
     0.729
CSCA_1682
Secretion protein HlyD family protein.
  
     0.727
CSCA_0324
Secretion protein HlyD family protein.
 
   
 0.711
CSCA_4664
Auxiliary transport protein, membrane fusion protein (MFP) family protein.
  
     0.708
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.