STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_3814Histidine kinase. (459 aa)    
Predicted Functional Partners:
CSCA_3815
Two component transcriptional regulator, winged helix family.
 
 
 0.959
CSCA_3813
Protein of unknown function DUF214.
 
    0.844
CSCA_1776
Two component transcriptional regulator, winged helix family.
 
 
 0.822
CSCA_1760
Multi-sensor hybrid histidine kinase.
 
 
0.816
CSCA_2411
Two component transcriptional regulator, winged helix family.
 
 
 0.813
CSCA_3574
PAS domain S-box domain-containing protein.
 
 
0.795
CSCA_3267
Regulatory component of sensory transduction system.
 
 
 0.778
CSCA_2361
Transcriptional regulator.
 
 
 0.725
CSCA_1569
Two component transcriptional regulator, winged helix family.
 
 
 0.696
CSCA_4599
Two component transcriptional regulator, winged helix family.
 
 
 0.695
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.