Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_3834Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. (77 aa)    
Predicted Functional Partners:
CSCA_3835
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family.
     0.992
CSCA_2035
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family protein.
     0.926
CSCA_2017
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family protein.
     0.925
CSCA_3836
Sarcosine reductase.
 
   
 0.897
CSCA_3837
Glycine/sarcosine/betaine reductase complex protein A.
 
     0.883
CSCA_3838
Sarcosine reductase.
 
   
 0.873
CSCA_3833
Betaine reductase.
 
   
 0.872
CSCA_3832
Fatty acid/phospholipid synthesis protein PlsX.
 
   
 0.868
CSCA_3841
GrdX protein.
 
   
 0.824
CSCA_2012
Glycine/sarcosine/betaine reductase complex component A2.
 
   
 0.799
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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