Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_3835Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. (348 aa)    
Predicted Functional Partners:
CSCA_3834
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family.
     0.992
CSCA_3836
Sarcosine reductase.
 
   
 0.917
CSCA_3838
Sarcosine reductase.
 
   
 0.912
CSCA_3837
Glycine/sarcosine/betaine reductase complex protein A.
 
     0.902
CSCA_3833
Betaine reductase.
 
   
 0.875
CSCA_3841
GrdX protein.
 
   
 0.874
CSCA_3832
Fatty acid/phospholipid synthesis protein PlsX.
 
   
 0.871
CSCA_2034
Glycine reductase complex component B subunit gamma.
 
     0.833
CSCA_2016
Betaine reductase complex component B subunit gamma.
 
     0.831
CSCA_2012
Glycine/sarcosine/betaine reductase complex component A2.
 
   
 0.818
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.