Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CSCA_3858Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (302 aa)    
Predicted Functional Partners:
CSCA_3857
Serine O-acetyltransferase.
 
 0.999
CSCA_0260
Cystathionine gamma-synthase.
 
 0.973
CSCA_1817
Cystathionine gamma-synthase.
 
 0.973
CSCA_4374
Cystathionine gamma-synthase.
  
 0.968
CSCA_2942
Methionine gamma-lyase.
  
 0.939
CSCA_0169
Cystathionine gamma-synthase.
  
 0.936
CSCA_2383
Aminotransferase class I and II.
    
 0.925
CSCA_2911
Aminotransferase class I and II.
    
 0.925
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
  
 
 0.920
CSCA_2745
Sulfite reductase, subunit C; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.913
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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