Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSCA_3882Adenylate cyclase. (178 aa)    
Predicted Functional Partners:
CSCA_3887
GTP pyrophosphokinase.
  
  
  0.911
CSCA_3999
Anaerobic ribonucleoside-triphosphate reductase.
  
  
  0.911
CSCA_4867
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
    
  0.901
CSCA_0074
Conserved protein with RelA/SpoT domain.
     
  0.900
CSCA_0875
Diguanylate cyclase (GGDEF) domain protein.
     
  0.900
CSCA_1821
Hypothetical protein.
     
  0.900
CSCA_2473
Protein of unknown function DUF265.
     
  0.900
CSCA_3883
Hypothetical protein.
 
    0.858
CSCA_3884
Heat shock protein DnaJ domain protein.
 
     0.815
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
    
  0.812
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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