Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_3904Sporulation protein YyaC. (179 aa)    
Predicted Functional Partners:
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.853
CSCA_3076
Stage III sporulation protein AE.
  
     0.749
CSCA_4239
Stage II sporulation protein E, protein serine/threonine phosphatase.
  
     0.743
CSCA_3077
Stage III sporulation protein AD.
  
     0.729
CSCA_3944
Stage II sporulation protein R.
  
     0.716
CSCA_3906
Sporulation transcriptional regulator SpoIIID.
  
     0.705
CSCA_4230
Transcriptional regulator, AbrB family.
  
  
 0.697
CSCA_3074
Stage III sporulation protein AG.
  
     0.686
CSCA_3058
Sporulation transcriptional activator Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
   
 0.684
CSCA_3079
Stage III sporulation protein AB.
  
     0.677
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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