STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_3966Mannose-1-phosphate guanylyltransferase (GDP). (355 aa)    
Predicted Functional Partners:
CSCA_3607
Nucleotidyl transferase.
  
 
 0.966
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
 
 0.948
CSCA_0026
Mannose-1-phosphate guanylyltransferase (GDP).
  
  
 
0.911
CSCA_0301
Mannose-1-phosphate guanylyltransferase (GDP).
  
  
 
0.911
CSCA_3961
Glycosyl transferase group 1.
 
  
 0.575
CSCA_3967
Excinuclease ABC C subunit domain protein.
       0.564
CSCA_3968
DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family.
       0.552
CSCA_3956
Glycosyl transferase group 1.
 
  
 0.548
CSCA_0025
Capsular polysaccharide biosynthsis protein.
  
  
 0.539
CSCA_4799
Undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.539
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.