Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_3976Putative D-proline reductase, PrdA proprotein. (700 aa)    
Predicted Functional Partners:
CSCA_3974
D-proline reductase (dithiol).
 
  
 0.995
CSCA_3983
D-proline reductase (dithiol).
 
  
 0.983
CSCA_4537
D-proline reductase.
 
  
 0.980
CSCA_3970
Proline racemase; Belongs to the proline racemase family.
 
  
 0.968
CSCA_3979
Proline racemase; Belongs to the proline racemase family.
 
  
 0.959
CSCA_3975
Hypothetical protein.
 
     0.951
CSCA_3977
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit.
 
   
 0.937
CSCA_3973
D-proline reductase, PrdB subunit, selenocysteine-containing.
 
     0.930
CSCA_3985
Putative D-proline reductase, PrdA proprotein.
 
  
 
0.917
CSCA_4535
D-proline reductase.
  
  
 
0.906
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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