Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_4047ErfK/YbiS/YcfS/YnhG family protein. (539 aa)    
Predicted Functional Partners:
CSCA_0955
GCN5-related N-acetyltransferase.
   
    0.602
CSCA_4048
Amidohydrolase-like protein; Belongs to the peptidase M20A family.
       0.546
CSCA_4781
Glycosyltransferase.
  
     0.519
CSCA_4044
Hypothetical protein.
       0.514
CSCA_3604
Membrane spanning protein.
  
     0.498
CSCA_4046
Hypothetical protein.
       0.490
CSCA_4045
Orn/Lys/Arg decarboxylase major region.
       0.474
CSCA_1304
TPR repeat-containing protein.
     
 0.471
CSCA_5121
CHAP domain containing protein.
  
    0.449
CSCA_4042
DNA polymerase III, delta' subunit.
   
   0.446
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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