Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_4048Amidohydrolase-like protein; Belongs to the peptidase M20A family. (390 aa)    
Predicted Functional Partners:
CSCA_4050
Peptidase U61 LD-carboxypeptidase A.
  
    0.613
CSCA_4049
Mg2 transporter protein CorA family protein.
  
    0.607
CSCA_4047
ErfK/YbiS/YcfS/YnhG family protein.
       0.546
CSCA_4044
Hypothetical protein.
       0.523
CSCA_4045
Orn/Lys/Arg decarboxylase major region.
       0.523
CSCA_4046
Hypothetical protein.
       0.523
CSCA_4043
Protein of unknown function DUF970.
       0.484
CSCA_4041
PSP1 domain protein.
       0.479
CSCA_4042
DNA polymerase III, delta' subunit.
       0.479
CSCA_4040
Hypothetical protein.
       0.476
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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