Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
sfsASugar fermentation stimulation protein; Belongs to the SfsA family. (231 aa)    
Predicted Functional Partners:
CSCA_4067
Hydrolase, NUDIX family.
       0.643
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.597
CSCA_4069
pro-sigmaK processing inhibitor BofA.
       0.584
CSCA_4063
Hypothetical protein.
       0.498
CSCA_4065
Hypothetical protein.
 
     0.472
CSCA_2960
Phosphoribosylformylglycinamidine synthase.
     
 0.446
CSCA_4066
Hypothetical protein.
       0.429
CSCA_1320
PTS system transcriptional activator.
       0.415
CSCA_3852
CinA domain protein; Belongs to the CinA family.
       0.403
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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