Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CSCA_4237Putative cell division protein FtsL. (90 aa)    
Predicted Functional Partners:
CSCA_3114
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
 
 
 
 0.900
CSCA_4236
Spore cortex biosynthesis protein YabQ.
 
    0.844
CSCA_3120
Hypothetical protein.
    
 
 0.839
CSCA_4238
RNA binding S1 domain protein.
 
  
 0.807
CSCA_4406
Cell cycle protein; Belongs to the SEDS family.
 
 
 
 0.803
CSCA_4235
Sporulation protein YabP.
  
  
 0.752
CSCA_4964
Penicillin-binding protein transpeptidase.
 
 
 0.716
CSCA_4963
Penicillin-binding protein transpeptidase.
 
 
 0.715
CSCA_4407
Peptidoglycan glycosyltransferase.
 
 
 0.697
CSCA_4962
Rod shape-determining protein MreD.
  
   
 0.686
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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