Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CSCA_4324Transcriptional regulator, GntR family. (308 aa)    
Predicted Functional Partners:
glmS
Methylaspartate mutase, S subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
     0.875
glmE
Methylaspartate mutase, E subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
     0.835
CSCA_4328
Methylaspartate ammonia-lyase.
 
     0.819
CSCA_4326
Glutamate mutase, MutL.
 
     0.783
CSCA_1302
Hypothetical protein.
  
  
 0.652
CSCA_4323
N-acetylmuramoyl-L-alanine amidase CwlD.
       0.558
CSCA_4329
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit.
       0.531
CSCA_4117
Metal dependent phosphohydrolase.
  
     0.530
CSCA_4331
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
     0.521
CSCA_4330
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type.
       0.509
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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