Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glmSMethylaspartate mutase, S subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (136 aa)    
Predicted Functional Partners:
glmE
Methylaspartate mutase, E subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
 0.998
CSCA_4328
Methylaspartate ammonia-lyase.
 
  
  0.991
CSCA_4326
Glutamate mutase, MutL.
 
   
 0.933
CSCA_4324
Transcriptional regulator, GntR family.
 
     0.875
CSCA_5290
methylmalonyl-CoA mutase, large subunit.
  
 
 0.866
CSCA_3876
Hypothetical protein.
  
 
 0.859
CSCA_5292
LAO/AO transport system ATPase.
  
 
 0.859
CSCA_1359
Glutamate dehydrogenase (NADP(+)); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.836
CSCA_0844
Glutamine synthetase, type I.
     
 0.808
CSCA_1788
Glutamine synthetase catalytic region.
     
 0.808
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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