Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_4330Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type. (186 aa)    
Predicted Functional Partners:
CSCA_4329
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit.
 0.999
CSCA_1735
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
 
 0.968
CSCA_1733
Succinate dehydrogenase.
  
 
 0.954
CSCA_0573
Malic enzyme.
 
 
 0.942
CSCA_3853
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)).
 
 
 0.940
CSCA_0379
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)).
 
 
 0.938
argH
Argininosuccinate lyase.
    
 0.834
CSCA_2041
Aminotransferase class I and II.
    
 0.804
CSCA_2098
Aminotransferase class I and II.
    
 0.804
CSCA_2759
Aminotransferase class I and II.
    
 0.804
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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