Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
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Co-expression
Experiments
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[Homology]
Score
CSCA_4396Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system. (115 aa)    
Predicted Functional Partners:
CSCA_4395
Putative transcriptional regulator, CopG family.
  
 
 0.978
CSCA_2456
Hypothetical protein.
  
 
 0.838
CSCA_4398
Transketolase central region.
       0.643
CSCA_4397
Transketolase domain protein.
       0.558
CSCA_4253
Transcriptional repressor, CtsR; Belongs to the CtsR family.
  
     0.553
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
       0.504
CSCA_4400
Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
       0.504
CSCA_4031
Transcriptional regulator, AbrB family.
 
   
 0.463
CSCA_5127
Transcriptional regulator, AbrB family.
 
   
 0.463
CSCA_0501
HxlR-like helix-turn-helix domain-containing protein.
   
    0.456
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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