Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_4409Membrane-bound metal-dependent hydrolase. (202 aa)    
Predicted Functional Partners:
CSCA_3999
Anaerobic ribonucleoside-triphosphate reductase.
  
 
 0.845
CSCA_5157
Hypothetical protein.
  
 
 0.845
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.749
CSCA_4814
PBS lyase HEAT domain protein repeat-containing protein.
 
     0.675
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.656
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
       0.585
CSCA_4407
Peptidoglycan glycosyltransferase.
     
 0.565
CSCA_4406
Cell cycle protein; Belongs to the SEDS family.
       0.562
folE
GTP cyclohydrolase I.
  
  
 0.544
CSCA_4408
Metal dependent phosphohydrolase.
       0.531
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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